Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015913518.1_cds_XP_016463562.1_56674
CDS Infomation

[gene=LOC107786573] [db_xref=GeneID:107786573] [protein=UPF0481 protein At3g47200-like] [protein_id=XP_016463562.1] [location=join(17194..17265,19070..20485)] [gbkey=CDS]
Sequence

ATGGCACACTCTATTGAGATTACCCAAATAGATCACCGAACTCCACTGCTTCGTCAAGCA
ACAAAAGACGAGAGAGAAGACGGGAGGAAAGATGATTATTTAATAGAGATCAAGGAGCGA
TTAAAGTTACAAAGAGATAAATCTTTGAATCAAATCTTTGATGAAAGATTTGAGGATTTG
GACAATTCATCTATCAAATCCACTACCATATTCAAAGTAAATGCGGCCATTCGCGAATCT
AACCCAGATGCTTATACGCCAAAGATGATCTCCATAGGTCCTTACCATAAAAAAAATCAA
GAACTTCACTCAATGGAAAAGTACAAATTATTATGCCTAAGACGGTTTCTCCAACGGAAA
GAGGGGCTTGATGTAGAAAGTTGCATTGGACAATTGGAGGAACTAAAGGACGAAGCAATA
AAGTGTTATGACGATATAGACAGTGATATTGTTGGCAAATTTTCGGAAATGTTGTTACTT
GATGGCTGTTTTGTGGTTGAGTTTATTCGAGACCCCCTAATTATCAACGCGCACTGGATG
GTGTCTCAAGTATGTCGAGATTTATTGCTACTAGAAAACCAACTCCCTTTCTTTGTCCTC
GCCAAACTTCATGACATGACTAAGCGTCCTGAAGATCTAGAACCCGACTTCATACGTATG
GTGAAATCGACTCTTTGTTATATTTCGCCAAGTAAGATACCTATGCTCAAATCAGAAATT
GATGGTGATGAAGAAAAATTCGACCATTTACTTCATGTGGTACACATGTTTTGTCGCCTA
TCAGAGATGACAAAAACTAGCCAAATCTCGAATTCTAGCATCAGAAAGGAATGTTGCAAT
ATTAAAAGATTTCTTGGAAAGATCTTGCGACTATTTAGGTCAAAAGAAATTTCTACCTCT
AATATTTGGCAGTCTTGGCAAGCTCCAACTGCAACAGAGCTTTATGAAGCTGGAGCTAGT
TTCATAAAACTAGGAAGTTTCGAAGCAGATCTTATGGATAGAACAACTATGTTCGATATC
AAGTTTGAGAATGCAGCGATACAAATTCCTTGTTTCGTAGTTGGTGATTCAACGGAGGCC
TTTCTGAGAAATTTGATAGCTTATGAGCAACACTCGACTAACTTATATCCTAAATGTTTT
TTGGATTATGTAGATATAATGGGTCAACTTATTAAGTCACGTAAAGATGTGAATTTGCTA
CGCCAAAATGGAATCATCCTTAACGGGCTAGCAGATGACGGAGAAGTGGCTAACATGTTC
AAAAAACTTGGAGAAGGGATCGTGGTTGTTGCTGACAGCACCTATTACGATGAAGCAAGC
ATAAAAATGAGTCAACATTGCAAAAAGCCGTGGAATCAAATTATGGCAAATTTGAGGCAA
AATTATTTTAGTAGTCCTTGGGCAGGAGCTTCAACTGTGGCAGCCGTCATACTCCTCATA
CTCACGGCTATGCAGACAGTTCTAGCTTTCAGAGATGGTATTAAGTAG

Peptide Sequence

PEP ID

XP_016463562.1
PEP Infomation

PREDICTED: UPF0481 protein At3g47200-like [Nicotiana tabacum]
Sequence

MAHSIEITQIDHRTPLLRQATKDEREDGRKDDYLIEIKERLKLQRDKSLNQIFDERFEDL
DNSSIKSTTIFKVNAAIRESNPDAYTPKMISIGPYHKKNQELHSMEKYKLLCLRRFLQRK
EGLDVESCIGQLEELKDEAIKCYDDIDSDIVGKFSEMLLLDGCFVVEFIRDPLIINAHWM
VSQVCRDLLLLENQLPFFVLAKLHDMTKRPEDLEPDFIRMVKSTLCYISPSKIPMLKSEI
DGDEEKFDHLLHVVHMFCRLSEMTKTSQISNSSIRKECCNIKRFLGKILRLFRSKEISTS
NIWQSWQAPTATELYEAGASFIKLGSFEADLMDRTTMFDIKFENAAIQIPCFVVGDSTEA
FLRNLIAYEQHSTNLYPKCFLDYVDIMGQLIKSRKDVNLLRQNGIILNGLADDGEVANMF
KKLGEGIVVVADSTYYDEASIKMSQHCKKPWNQIMANLRQNYFSSPWAGASTVAAVILLI
LTAMQTVLAFRDGIK

Transcript Sequence

Gene sequence data has not been registered.